Browse of TCMCG057C30882 protein

CDS

Accession Number	TCMCG057C30882
gbkey	CDS
Protein Id	XP_018440606.1
Location	complement(join(3622710..3622817,3622911..3622994,3623085..3623315,3623410..3623565,3623653..3623749,3623906..3624082,3624171..3624526,3624751..3624849,3624979..3625162,3625234..3625379,3625465..3625519,3625768..3626407,3626693..3626840,3626942..3627016,3627222..3627372,3627637..3627737,3627809..3627892,3628017..3628162,3628244..3628412,3628588..3628689,3628773..3628847,3628931..3629011,3629095..3629201,3629497..3629562,3629645..3629790,3629894..3630028,3630187..3630323,3630711..3630785,3630864..3631049,3631303..3631425,3631506..3631616,3631943..3632035,3632394..3632465,3632581..3632703,3632784..3632896,3633138..3633234,3633545..3633721,3633831..3633968,3634367..3634578,3634667..3634826))
Gene	LOC108812758
GeneID	108812758
Organism	Raphanus sativus

Protein

Length	1911aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018585104.1
Definition	PREDICTED: rRNA biogenesis protein RRP5-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Protein RRP5 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGTGGCTCCGTCGAGAAAAGTCCCGAGCGGAAAACGTAACGATTCTAACAAAGTATTCAAATCATCGAAGAAACCGTTCAAAAAGACGAAGGACGATGTCGCTGCGAGGTCTGAAGCCATGGCTCTGCAGCTCGAAGAGGTTCCCGACTTCCCTCGAGGTGGAGGTTCTTCTCTGAGCAAGAAAGAGCGTGAGAAGATTCATGAAGAGGTCGACGCTGAGTTCGACGCTGGGGATGAGCGTGTTGCTAAGAGGAGTAAAGGAGGTAAACCTAAGAAGAGAACCCCTAGGGATGTAGACGAATTGGGATCTCTTTTCGACGGTGGTTTAACCGGAAAACAGCCAAGATATGCCAATAAGATCACCACTAAGAATATTTCCGCGGGAATGAAGCTTCTGGGGGTTGTTACTGAAGTGAACCAGAAAGATATTGTAATTAGTCTCCCTGGGGGCTTACGTGGTTTAGTTCGCGCAAGCGAGGCATTGGATTTTACAGATTTCGGAACTGAGGACGATGAAAATGAACTCCTTGGAGACATCTTTTCTGTGGGTCAGCTTGTTCCCTGCATTGTATTGCAGTTAGATGATGATGATAAGAAGGAAGCGGGCAAAAGGAAAATATGGCTTTCATTGCGACTTTCTCTTTTGCACAAGGGTTTCAATTTGGATTCCTTTCAGCCAGGGATGGTGGTAACTGCAAATGTGAAAAGCGTGGAAGATCATGGTTATATCCTTCAATTTGGAATGCCTTCTATCACAGGATTTATCAAAAAAAGCCATGAAGGAACTCAGGAGTTAAAGACTGGGCAGCTTATTCAGGGCGTGGTTACAAATATTGATAAAGAACGTAAAATTGTTCGTCTTAGTTCTGACCCAGATTCAGTGGCAAAGTGTGTGACCAAGGATCTGAGTGGGATGTCGTTCGATCTTCTCATCCCAGGCATGATGGTTAATGCCCGTGTTCAACATGTCCTTGAGAACGGATTACTATTAGGATTTCTTATGTACTTTACTGGAACGGTTGATCTATTCCATCTACAAAATCCATTATGTAACAAGAGCTGGAAGGATGAATATAATCAGACTAAGATGGTTAATGCTAGAATATTATTTATGGATCCATCAACTAGAGCTGTTGGTTTGACGTTAAACCCACATCTTGTTGGCAACAAGGCTCCTCCTTTGCTCGTCTCCAGTGGAGACATATTCGACGAAGCAAAAGTTGTCCGTGTTGATAAATCAGGCCTTCTTCTTGAGCTCCCTTCTAACCCTGTTTCAACTCCAGCATATGTTAGCACATATGACGCTGTTGAAGATGAAGTAAAGAAACTGGAAAAGAATTTCAAGGAAGGAAACCGCATCCGTGTTCGAGTGCTCGGCCTTAAGCAGATTGAGGGGTTGGCCATAGGGACTTTAAAGGAAAGCGCCTTTGAAGGTCCAGCGTTCACCCACTCAGATGTCAAGCCGGGCATGGTGACGAAGGCTAAAGTCATATCTGTTGATACATTTGGTGCCATTGTGCAATTTCCGGGTGGTCTGAAAGCAATGTGCCCACTTCAGCATATGTCTGAGTTTGAAGTTACGAAGCCCAGGAAGAAGTTTAAGGTTGGAGCTGAATTAATATTTCGTGTTCTTGGCTGCAAATCAAAGAGAATAACTGTTACCTGCAAGAAAACACTTGTTAAGTCAAAACTTCCGATTTTGAGTTCTTACGCTGATGCAACTGAAGGACTGGTGACACATGGCTGGATAACAAAGATTGAAAAGCATGGATGCTTTGTTCGCTTCTATAATGGAGTGCAAGGGTTTGTTGCCAGATTTGAACTTGGTTTGGAGCCAGGAAGTGATCCCGCTTCAGTGTTTCATGTTGGGGAGGTTGTCAAATGTAGAGTTGCCAGTGCGGTTCATGGTACTCGAAGGATCAACCTCAGTTTTATGATAAAGCCAACAAGCGTTTCTGAAGACGATTCAATCAAGTTAGGTAGTATTGTATCTGGGGTAATTGATAGTATAACTCCTCAGGCAGTCACTGTCCATGTTAAATCCAAAGGTCTTCTGAAGGGTACAATTTCTGCAGAACATTTAGCTGATCATCATGACCAAGCAAAATTAATGATATCACTTTTAAGACCTGGATTTGAGCTTGATAAGCTGCTGGTAATAGACATTGAAGGCAACAACTTGGCTCTCTCTTCAAAATATTCTCTCATCAAGTTTGCTGAAGAGCTCCCTTCGGACTTTAGTCAGCTCCAGCCAAACTCAGTGGTTCATGGCTATGTTTGCAACCTGATTGAAAATGGCTGTTTCGTCCGTTTTCTTGGTCGGTTGACTGGTTTCGCCCCGAGAAGCAAGGCAATTGACGAACCCAGGGCAGATCTGTCAGAGTCCTTCTTTGTTGGACAATCGGTTCGGGCTAATATAGTTGATGTCAATCAAGAAAAAAGCAGGGTGACTCTTTCATTGAAACAGTCATCTTGTGCTTCTGTAGATGCTTCTTTTGTTCAAGAGTATTTCCTTACGGATGAGAAGATCTCTAACTTGCAATCATCTGATATTGCTGAAAGCGAGTGTAGCTGGGTTGAGAAATTCTCTATTGGGAGTTTGATCAAGGGAACCGTACAGGACAAAAATGACCTTGGTTTGGTGGTGAATTTTGACAATGTTAATAATGTCCTTGGTTTTATACCCAAGTATCATTTGGGTGGAACTAGTTTGGAAAACGGTTCTGTTGTCCAAGCAGTTGTTCTTGATATTTCTAGGGCAGAGAGACTAGTTGATTTGTCTTTGAAGCCTGAGCTCATAAACAGCTCAGCCAAAGAGGTGTCCAACAGTCAGTCAAAAAAGAAACGTAAAAGAGGTATTTCCAAGGAACCTGAAGTCCACCAGAGGGTCAGCGCTGTTGTAGAGATTGTGAAGGAGCAATACTTGATTTTGTCGATTCCAGAACATAATTACACTATAGGATATGCCGCAGTATCAGACTATAACACACAGAAGTTACCAGTGAAACAGTTTTCCACTGGACAAAGTGTTGTTGCGTCTGTTGAGGCTTTGCAAAACCCTTTGACGTCCGGGAGGTTGCTTTTACTTCTTGACTCAGTTTCCGGGAATTCTGAGACATCGTCTAAGAGGGCAAAGAAGAAATCCAACTGTGAAGTTGGTTCTGTTGTCCAAGCGGAGATTACTGAAATAAAGCCTTTTGAAGTAAGAGTAAACTTTGGCCAAAGTTTCCGAGGAAGAATCCACATAACGGAGGTGAATGATGTAGGTACAAGTGAAGAACCTTTTGCCAAATTTAGAGTCGGGCAATCAGTGTCTGCAAGGGTTGTTGCAAAGCCCTCTCATACGGATAATAAAAAGAGTCAACTCTGGGAGCTTTCTGTAAAGCCTTCATTACTTAGAGACTCTGGTGGGCTGACTGACGTGAGGGACCAACTTGAGTTTGTTTCTGGAGAGCGTGTCTGCGGATATGTCTATAAAGTGGATAAAGAATGGGTTTGGTTGGCAATATCTCGCAATGTGACGGCACGCATATACATTTTAGACACTGCATGCGATGCTCGTGAACTTGAGGAGTTCGAGGGGCGCTTTCCCATTGGTAAAGCTGTTTCAGGCTATGTTTTGACGTACAACCAAGAAAAGAAAACATTACGGTTGGTTCAGCGTCCACTACTGAATATCCAGAAAAGCATTGCCAATGATGGAGGGCCTAAAAAGGATAATCTAGACAGTAGCATTCCTGGTGGTGATGCTACTCTATTCATTCATGAAGGAGACATTTTGGGTGGAAGAATTTCTAAGATACTTCCTGGTGTTGGTGGACTTCGTGTGCAAATAGGTCCTTACGTGTTTGGGAGAGTTCACTTTACTGAAATCAATGATTCATGGGTCTCCAATCCATTAGATGGTCTTCACGAAGGCCAATTTGTCAAATGCAAGGTCTTAGAAATCAGCAATTCTAGTAAAGGGACTTTGCAAATTGAACTGTCATTACGGACATCACTAGATGGCATGAGTTCTGACCATCTCTCAGAAGCTTTCCATGTTTACAAGCGCTTTGAAAGGATTGAAGATCTTTCTCCTGACATGGGCATCGAGGGTTATGTTAAGAATACGATGTCAAAAGGCTGTTTTATCATGCTTTCAAGAACACTCGACGCAAAAGTTCTATTGTCAAATCTATCTGATACATATGTCAAGGATCCCGAAAATGAATTTCCAGTAGGAAAACTTGTCACTGGCAGGGTGCTAAATGTGGAGCCGTTATCGAAGCGGGTAGAAGTCACTTTGAAGAAAGAAAAATCTGGTGGGCCACCAAAATCTGAATCTTATGACCTGAAGCAATTCCATGTTGGAGACGTGATTTCTGGGAGGATCAAACGTGTGGAGCCCTATGGCTTGTTCATTGAAATAGATCAAACGGGCATGGTTGGATTATGTCATAAATCACAGTTTTCTGATGATCATATCGAGGACATACATGCCAGATATGAAGCTGGGGAAAGCGTCACCGCAAAGATTTTGAAGCTGGACGAGGAAAAGCGACGTATATCGCTTGGGATGAAGAGTTCATATTTTATGAACAGCGATGATGACAAGGCACAGCCACGTTCTGAAGAAAACGCTGATGAAGCGAGCATGGAATGTGATCCAATCGATGATTCGAAGTCGGGAGTTCTTACAGCAGTTGGTGATTTTGGGTTCAATGGAACTTCTCTGGCTATTGCCCAAGTTGAGTCAAGGGCTTCTATCCTTCCGCTTGAGGTTGACCTTGACGACATTGAGGAGGCGGACTTTGACAAGAATCAAAATCAGAAACTACAGGGAGCCGATAAAGATGAAAAGAGCAAGAGAAGGGAAAAGCAAAAAGACAAGGAGGAAAGAGAGAAAAAGATACAAGCTGCTGAAGGGAGGTTGCTGGAGAATCACGCTCCCGAGAGTGCTGATGAATTTGAGAAATTGGTTAGAAGCTCTCCAAATAGCAGCTTTGTGTGGATTAAGTATATGGCGTTCATGCTCAGTTTGGCTGATATTGAGAAAGCCAGGTCCATTGCTGAGAGGGCTTTGAGGACTATAAATATTCGCGAAGAAGAAGAGAAGCTAAACATATGGGTTGCTTACTTCAACTTGGAAAATGAACATGGAAGTCCTCCAGAGGAAGCGGTAAAGAAAGTGTTCGAAAGAGCGCGTCAATACTGTGACCCAAAGAAAGTTTACAATGCCCTCTTGGGAGTGTACGAGAGAACAGAACAATATAAATTGGCTGATAAGCTACTTGACGAGATGATCAAGAAGTTCAAGCAATCCTGCAAGGTTTGGTTACGGAAGATACAAAGTTGTCTAAAGCAAGACGTGGAAGACATTCAGTCCGTGGTGAACCGTGCCTTGCTATGTCTTCCGCGCCATAAGCATATTAAATTCATATCACAGACCGCTATTCTTGAGTTCAAATGCGGAGATGCAGACAGAGGGAGGTCACTGTTTGAAGGCGTCCTTAGGGAATACCCGAAAAGAACGGACTTGTGGAGTGTTTACCTTGACCAGGAGATCCGGTTGGGGGAAGTTGATGTGATTAGGTCGTTGTTCGAGAGAGCCATTAGCTTGAGCTTGCCTCCTAAGAAGATGAAGTTTTTATTTAAGAAGTTTTTGGAATATGAGAAAGCTGGTGGTGACGAGGAGAGAGTGGAGTACGTGAAGCAAAGGGCAATGGAGTATGCAGACAGTACTTTGGCCTGA

Protein:   MVAPSRKVPSGKRNDSNKVFKSSKKPFKKTKDDVAARSEAMALQLEEVPDFPRGGGSSLSKKEREKIHEEVDAEFDAGDERVAKRSKGGKPKKRTPRDVDELGSLFDGGLTGKQPRYANKITTKNISAGMKLLGVVTEVNQKDIVISLPGGLRGLVRASEALDFTDFGTEDDENELLGDIFSVGQLVPCIVLQLDDDDKKEAGKRKIWLSLRLSLLHKGFNLDSFQPGMVVTANVKSVEDHGYILQFGMPSITGFIKKSHEGTQELKTGQLIQGVVTNIDKERKIVRLSSDPDSVAKCVTKDLSGMSFDLLIPGMMVNARVQHVLENGLLLGFLMYFTGTVDLFHLQNPLCNKSWKDEYNQTKMVNARILFMDPSTRAVGLTLNPHLVGNKAPPLLVSSGDIFDEAKVVRVDKSGLLLELPSNPVSTPAYVSTYDAVEDEVKKLEKNFKEGNRIRVRVLGLKQIEGLAIGTLKESAFEGPAFTHSDVKPGMVTKAKVISVDTFGAIVQFPGGLKAMCPLQHMSEFEVTKPRKKFKVGAELIFRVLGCKSKRITVTCKKTLVKSKLPILSSYADATEGLVTHGWITKIEKHGCFVRFYNGVQGFVARFELGLEPGSDPASVFHVGEVVKCRVASAVHGTRRINLSFMIKPTSVSEDDSIKLGSIVSGVIDSITPQAVTVHVKSKGLLKGTISAEHLADHHDQAKLMISLLRPGFELDKLLVIDIEGNNLALSSKYSLIKFAEELPSDFSQLQPNSVVHGYVCNLIENGCFVRFLGRLTGFAPRSKAIDEPRADLSESFFVGQSVRANIVDVNQEKSRVTLSLKQSSCASVDASFVQEYFLTDEKISNLQSSDIAESECSWVEKFSIGSLIKGTVQDKNDLGLVVNFDNVNNVLGFIPKYHLGGTSLENGSVVQAVVLDISRAERLVDLSLKPELINSSAKEVSNSQSKKKRKRGISKEPEVHQRVSAVVEIVKEQYLILSIPEHNYTIGYAAVSDYNTQKLPVKQFSTGQSVVASVEALQNPLTSGRLLLLLDSVSGNSETSSKRAKKKSNCEVGSVVQAEITEIKPFEVRVNFGQSFRGRIHITEVNDVGTSEEPFAKFRVGQSVSARVVAKPSHTDNKKSQLWELSVKPSLLRDSGGLTDVRDQLEFVSGERVCGYVYKVDKEWVWLAISRNVTARIYILDTACDARELEEFEGRFPIGKAVSGYVLTYNQEKKTLRLVQRPLLNIQKSIANDGGPKKDNLDSSIPGGDATLFIHEGDILGGRISKILPGVGGLRVQIGPYVFGRVHFTEINDSWVSNPLDGLHEGQFVKCKVLEISNSSKGTLQIELSLRTSLDGMSSDHLSEAFHVYKRFERIEDLSPDMGIEGYVKNTMSKGCFIMLSRTLDAKVLLSNLSDTYVKDPENEFPVGKLVTGRVLNVEPLSKRVEVTLKKEKSGGPPKSESYDLKQFHVGDVISGRIKRVEPYGLFIEIDQTGMVGLCHKSQFSDDHIEDIHARYEAGESVTAKILKLDEEKRRISLGMKSSYFMNSDDDKAQPRSEENADEASMECDPIDDSKSGVLTAVGDFGFNGTSLAIAQVESRASILPLEVDLDDIEEADFDKNQNQKLQGADKDEKSKRREKQKDKEEREKKIQAAEGRLLENHAPESADEFEKLVRSSPNSSFVWIKYMAFMLSLADIEKARSIAERALRTINIREEEEKLNIWVAYFNLENEHGSPPEEAVKKVFERARQYCDPKKVYNALLGVYERTEQYKLADKLLDEMIKKFKQSCKVWLRKIQSCLKQDVEDIQSVVNRALLCLPRHKHIKFISQTAILEFKCGDADRGRSLFEGVLREYPKRTDLWSVYLDQEIRLGEVDVIRSLFERAISLSLPPKKMKFLFKKFLEYEKAGGDEERVEYVKQRAMEYADSTLA